Package org.jmol.api
Interface JmolPropertyManager
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PropertyManager
public interface JmolPropertyManager
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description boolean
checkPropertyParameter(java.lang.String name)
java.lang.Object
extractProperty(java.lang.Object property, java.lang.Object args, int pt, javajs.util.Lst<java.lang.Object> v2, boolean isCompiled)
java.lang.String
fixJMEFormalCharges(javajs.util.BS bsAtoms, java.lang.String s)
java.lang.String
getAtomData(java.lang.String atomExpression, java.lang.String type, boolean allTrajectories)
java.lang.String
getChimeInfo(int tok, javajs.util.BS selectionSet)
java.lang.String
getDefaultPropertyParam(int propertyID)
java.util.Map<java.lang.String,java.lang.Object>
getLigandInfo(java.lang.Object atomExpression)
java.lang.String
getModelCml(javajs.util.BS bs, int nAtomsMax, boolean addBonds, boolean doTransform, boolean allTrajectories)
java.lang.String
getModelExtract(javajs.util.BS atomBitSet, boolean doTransform, boolean isModelKit, java.lang.String type, boolean allTrajectories)
java.lang.String
getModelFileInfo(javajs.util.BS visibleFramesBitSet)
java.util.Map<java.lang.String,java.lang.Object>
getModelInfo(java.lang.Object atomExpression)
java.lang.String
getPdbAtomData(javajs.util.BS bs, javajs.util.OC out, boolean asPQR, boolean doTransform, boolean allTrajectories)
java.lang.String
getPdbData(int modelIndex, java.lang.String type, javajs.util.BS bsA, java.lang.Object[] parameters, javajs.util.OC oc, boolean addStructure)
java.lang.Object
getProperty(java.lang.String returnType, java.lang.String infoType, java.lang.Object paramInfo)
int
getPropertyNumber(java.lang.String name)
void
setViewer(Viewer vwr)
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Method Detail
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setViewer
void setViewer(Viewer vwr)
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getProperty
java.lang.Object getProperty(java.lang.String returnType, java.lang.String infoType, java.lang.Object paramInfo)
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getDefaultPropertyParam
java.lang.String getDefaultPropertyParam(int propertyID)
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getPropertyNumber
int getPropertyNumber(java.lang.String name)
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checkPropertyParameter
boolean checkPropertyParameter(java.lang.String name)
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extractProperty
java.lang.Object extractProperty(java.lang.Object property, java.lang.Object args, int pt, javajs.util.Lst<java.lang.Object> v2, boolean isCompiled)
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getModelInfo
java.util.Map<java.lang.String,java.lang.Object> getModelInfo(java.lang.Object atomExpression)
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getLigandInfo
java.util.Map<java.lang.String,java.lang.Object> getLigandInfo(java.lang.Object atomExpression)
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getModelFileInfo
java.lang.String getModelFileInfo(javajs.util.BS visibleFramesBitSet)
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getChimeInfo
java.lang.String getChimeInfo(int tok, javajs.util.BS selectionSet)
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getModelExtract
java.lang.String getModelExtract(javajs.util.BS atomBitSet, boolean doTransform, boolean isModelKit, java.lang.String type, boolean allTrajectories)
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getPdbAtomData
java.lang.String getPdbAtomData(javajs.util.BS bs, javajs.util.OC out, boolean asPQR, boolean doTransform, boolean allTrajectories)
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getPdbData
java.lang.String getPdbData(int modelIndex, java.lang.String type, javajs.util.BS bsA, java.lang.Object[] parameters, javajs.util.OC oc, boolean addStructure)
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getModelCml
java.lang.String getModelCml(javajs.util.BS bs, int nAtomsMax, boolean addBonds, boolean doTransform, boolean allTrajectories)
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getAtomData
java.lang.String getAtomData(java.lang.String atomExpression, java.lang.String type, boolean allTrajectories)
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fixJMEFormalCharges
java.lang.String fixJMEFormalCharges(javajs.util.BS bsAtoms, java.lang.String s)
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